#NEXUS

[Hillielleae alignment, status checked Jan 09 2018]
[ITS-1: 1-289, 5.8S rDNA: 290-453, ITS-2: 454-659]


BEGIN DATA;
DIMENSIONS NTAX=13 NCHAR=659;
FORMAT DATATYPE=DNA GAP=- MISSING=? ;

MATRIX
OUT_Arabidopsis_thaliana_AJ232900                 TCGATACCTGTCCAAAACAGAACGACCCGCGAACCAAAGATCACCACTCTCGGTGGGCCGGTTT-CTTAGCCGATTCCTTGCCCGCCGGATCCGTGGTTTCGCGTA--------------------TCGGCATGATCGGGAGCTTTTATCTCGGTCTTGTCGTGCGCGTTGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGTCAAGGAACATGCAAACGAACGGCTGGCATTCGCCTCCCCGGAGACGGAGTGTGGGCGGATGCTGTGCTGCGAACTGAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCTCACCATCC---TTT--GCTGATGCGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCTAAATCCGAGCCAAGGACGCCTGGAGCGTACCGACATGCGGTGGTGAA----------CTTGATCCATTACATTTTATCGGTCGCTCTTGTCCGG---AAGCTGTAGATGACCCAAAGTCCATATA
OUT_Clausia_aprica_DQ357529                       TCGATACCTGTCCAAAACAGAACGACCAGCGAACGAGAGATCATCACTCTCGGCGGGCCGATTTTCCTAGCGGATCTCGTGCCCGCCAAGTCCGTGGTTTTGCGTACTGTTC--CCATGAAGAGTTTCGGCTCGATTGGG-------------------TCATGCGCTCAGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGCCAAGGAACATGAAACTAAACAGCTTGCGTTCGCTGCCCCGGAGACGGTGTGCGTGCGGATGACAAGCTGCAATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCGGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCC--CATCCATCTTT--G--GATAAGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGNTTAGGACGTCTGGAGCGTCTCGACATGCGGTGGTGAAACAAAAGCCTCTT---------CGTTGAGTCGGTCGTTCCTGTCCGTTACGAGCTTTCGATGACCCAAAGTTCTCAAC
Hilliella_sinuata_subsp_qianwuensis_AH007986      TCGATACCTGTCCCGAACAGAACGACCCGCGAACAATCGATCACCACTCTCGGTAGGCCGGTTC-TTAAACAGTCCTCGCGTCTACCGATTCCGTGGCTTCGCGTATGTCTC--CATCGAGA-GTTTTACCTCGGTGGGT-------------------TCATGCACGCGGCTTCCGGATATCACAAAACCACGGCACGAAAAGTGTCAAGGAACATCGAACCGATCGGCCGGCCTTCGCCGCCCCGGAGACGGTGCGCGTGCGGTTGCCG-GCTGCAATCTAAAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA--CATCC---C-CCTAAGGGTACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCGAAATCCGAGCTAAGGGCGCCAGGAACGTCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATACGGTCGGCCGCTCCTGTCCGG---ATGCTCTCGATGACCCAAAGTTCTCAAC
Hilliella_hunanensis_KX244373                     TCGATACCTGTCCCGAACAGAACGACCCGCGAACAATCGATCACCACTCTCGGTAGGCCGGTTC-CTAAACAGTCCTCGCGTCTACCGATTCCGTGGCTTCGAGCACGTCTC--CATCGAGA-GTTTTACCTCGGTGGGT-------------------TCATGCACGCGGCTTCCGGATATCACAAAACCACGGCACGAAAAGTGTCAAGGAACATCGAACCGATCGGCCGGCCTTCGCCGCCCCGGAGACGGTGCGCGTGCGGAAGCCATGCTGCAATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CCCCTAAGGATACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCGAAATCCGAGCTAAGGGCGCCAGGAACGTCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATACGGTCGGCCGCTCCTGTCCGG---ATGCTCTCGATGACCCAAAGTTCTCAAC
Hilliella_rupicola_KX244379                       TCGATACCTGTCCTGAACAGAACGACCCGTGAACAATCGATCACCACTCTCGGTAGGCCGGTTC-CTAAACAGTCCTCGCGTCTACCAATTCTGTGGCTTCGAGCACGTCTC--CATCGAGA-GTTTTACCTCGGTGGAT-------------------TCATGCACGCGGCTTCCGGATATCACAAAACCACGGCACGAAAAGTGTCAAGGAACATCGAACCGATCGGCCTGCCTTCGCCGCCCCGGAGACGGTGCGCGTGCGGAAGCCGTGCTGCAATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CCCCTAAGGATACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGTACGCGGTTGGCCGAAATCCGAGCT-AGGGCGCCAGGAACGTCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATACGGTCGGCCGCTCCTGTCCGG---ATGCTCTCGATGACCCAAAGTTCTCAAC
Hilliella_rupicola_subsp_shuangpaiensis_KX244378  TCGATACCTGTCCTGAACAGAACGACCCGTGAACAATCGATCACCACTCTCGGTAGGCCGGTTC-CTAAACAGTCCTCGCGTCTACCAATTCTGTGGCTTCGAGCACGTCTC--CATCGAGA-GTTTTACCTCGGTGGAT-------------------TCATGCACGCGGCTTCCGGATATCACAAAACCACGGCACGAAAAGTGTCAAGGAACATCGAACCGATCGGCCTGCCTTCGCCGCCCCGGAGACGGTGCGCGTGCGGAAGCCGTGCTGCAATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CCCCTAAGGATACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGTACGCGGTTGGCCGAAATCCGAGCT-AGGGCGCCAGGAACGTCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATACGGTCGGCCGCTCCTGTCCGG---ATGCTCTCGATGACCCAAAGTTCTCAAC
Hilliella_hui_KX244375                            TCGATACCTGTCCCGAACAGAACGACCCGCGAACAAACGATCACCACTCTCGGTAGGCCGGTTC-CTAAACAGTCCTCGCGTCTACCGATTCCGTGGCTTCGAGCACGTCTC--CATCGAGA-GTTTTACCTCGTTGGGT-------------------TCATGCACGCGGCTTCCGGATATCACAAAACCACGGCACGAAAAGTGTCAAGGAACATCGAACCGATCGGCCTGCCTTCGCCGCCCCGGAGACGGTGCGCGTGCGGAAGCCGTGCTGCAATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CCCCGAAGGATACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCGAAATCCGAGCTAAGGGCGCCAGGAACGTCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATACGGTCGGCCGCTCCTGTCCGG---ATGCTCTCGATGACCCAAAGTTCTCAAC
Hilliella_fumarioides_KX244381                    TCGATACCTGTCCAAAACAGAACGACCAGCGAACTTTCGATCAACACTCCCGGTAGGCCGGTTT-CTTGACAGATCTCGTGCCTACCGGATCCGTGGTCTCGCTCATGTTTC--CCTCAAAATGTTTTACATTGGTTGGA-------------------TCATGGGCGCGGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGTCAAGGAACATGCAACTAAACAGCCTGCCTCCGCCGCCCCGGAGACGGTGTGCGCGCGGATGCAGTGCTGCTAAATAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCGGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCA--CATCC---CTC--GAGGACACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCAAAATCCGAGCTAAGGACGCTAGGAGCGTCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATATCGTCGGCCGCTCCTGTCCGG---ATGCTCTCGATGACCCGATATCGTCAAC
Hilliella_rivulorum_KX244376                      TCGATACCTGTCCCGAACAGAACGACCCGCGAACAATCGATCACCACTCTCGGTAGGCCGGTTC-CTTAACAGTCCTCGCGTCTACCGATTCCGTGGCTTCGCGTATGTCTC--CATCGAGA-GTTTTACCTCGGTGGGT-------------------TTATGCACGCGGCTTCCGGATATCACAAAACCACGGCACGAAAAGTGTCAAGGAACATCGAACCGATCGGCCGGCCTTCGCAGCCCCGGAGACGGTGTGCGTGCGGATCCCGTGCTGCAATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CCCCCAAGGGTACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCGAAATCCGAGCTAAGGGCGCCAGGAACGTCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATACGGTCGGCCGCTCCTGTCCGG---ATGCTCTCGATGACCCAAAGTTCTCAAC
Hilliella_sinuata_KX244377                        TCGATACCTGTCCCGAACAGAACGACCCGCGAACAATCGATCACCACTCTCGGTAGGCCGGTTC-CTAAACAGTCCTCGCGTCTACCGATTCCGTGGCTTCGCGTATGTCTC--CATCGAGA-GTTTTACCTCGGTGGGT-------------------TCATGCACGCGGCTTCCGGATATCACAAAACCACGGCACGAAAAGTGTCAAGGAACATCAAACCGATCGGCCGGCCTTCGCTGCCCCGGAGACGGTGCGCGTGCGGATGCCGTGCTGCAATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CCCCTAAGGGTATGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCGAAATCCGAGCTAAGGGCGCCAGGAACGTCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATACGGTCGGCCGCTCCTGTCCGG---ATGCTCTCGATGACCCAAAGTTCTCAAC
Hilliella_yixianensis_KX244372                    TCGATACCTGTCCCGAACAGAACGACCCGCGAACAACCGATCATCACTCTCGGTAGGCCGGATT-CCCGACGGTCTCCGCGCCTACCGATTCCGTGGTTTCGCGCACGTTTCAGCC----AAGGTCTTGCCTCGGCGGGT-------------------TCGTGCGCGCAGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGTCAAGGAACATTGCACCGATCGGCCTGCCTTCGCCGCCCCGGAGACGGTGCGCGTGCGGATGCAGCGCCGCGATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CCC--GAGGATACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCGAAATCCGAGCCAAGGACGCAGGGAGCGCCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATATCGTCGGCCGCTCCTGTCCGG---ACGCTCTAGATGACCCAAAGTCCTCAAC
Hilliella_paradoxa_KX244380                       TCGATACCTGTCCCGAACGGAACGACCCGCGAACAACCGATCATCACTCTCGGTAGGCCGGGTT-CCCGACGGTCCCCGCGCCTACCGATTCCGTGGTTCCGCGCACGTTTCAGCC----AAGGTCTCGCCTCGGCTGGT-------------------TCGTGCGCGCAGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGTCAAGGAACATCGAACCGATCGGCCTGCCTTCGCCGCCCCGGAGACGGTGCGCGTGCGGATGCAGCGCCGCGATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CCC--GAGGATACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCGAAATCCGAGCCAAGGACGCAGGGAGCGCCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATATCGTCGGCCGCTCCTGTCCGG---ACGCTCTAGACGACCCAAAGTCCTCAAC
Hilliella_lichuanensis_KX244374                   TCGATACCTGTCCCGAACAAAACGACCCGCGAACAACCGATCATCACTCTCGGTAGGCCGGGTT-CCTGACGGTCTCCGCGCCTACCGATTCCGTGGTTCCGCGCACGTTTCAGCC----AAGGTCTCGCCTCGGCTGGT-------------------TCGTTCGCGCAGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGTCAAGGAACATTGAACCGATCGGCCTGCCTTCGCCGCCCCGGAGACGGTGCGCGTGCGGATGCAGCGCCGCGATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCA--CATCC---CTC--GAGGATACGGGACGGAAGCTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCGAAATCCGAGCCAAGGACGCAGG-AGCGCCCCGACATGCGGTGGTGAATC-CAAGCCTCGT---------CATATCGTCGGCCGCTCTTGTCCGG---ACGCTCTAGACGACCCAAAGTCCTCAAC
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